A surprising new role for ApoE offers explanation for its diverse range of effects, particularly in Alzheimer's

Buck Institute/UCLA study finds that apolipoprotein E enters the nucleus and binds to promoter region of 1700 genes. 

January 13, 2015/Novato, California:  A study from the Buck Institute and UCLA offers an explanation for why a particular genetic form (allele) of apolipoprotein E (ApoE) poses the most significant genetic risk for Alzheimer’s disease.  Publishing on January 20th in The Journal of Neuroscience, researchers cast the lipid-binding ApoE4 in an entirely new light, showing that it is a transcription factor that enters the nucleus and binds DNA with high affinity, including the promoter regions of 1700 different genes. Seventy-five million Americans are ApoE4 carriers, putting them at increased risk for Alzheimer’s disease, and another 7 million carry two copies of ApoE4, giving them an even higher, 10 – 12 fold increased risk of developing Alzheimer’s.
“When the genes whose promoters bind ApoE4 are considered in functional groups, their relationship to Alzheimer’s disease is striking,” said co-senior author Dale Bredesen, MD, Buck Institute faculty and a professor at the Easton Laboratories for Neurodegenerative Disease Research at UCLA, “ApoE4 targets genes associated with sirtuins and aging, insulin resistance, inflammation and oxidative damage, accumulation of amyloid plaques and tangled tau among others. This provides a roadmap for what is essentially a ‘unified theory’ of Alzheimer’s disease.”
“Our group hopes this work will lead to a new type of screen for Alzheimer’s prevention and treatment,” said co-senior author Rammohan Rao, PhD, an associate research professor at the Buck Institute. “We are also designing and engineering novel drug candidates that target not one, but several of the ApoE4 mediated pathways simultaneously. Ultimately we want to develop a drug that can be given to ApoE4 carriers that would prevent the development of Alzheimer’s disease, and these results provide a mechanism and screen to do that.”

“This is an exciting, unexpected discovery that should be of great interest to neuroscientists,” said Caleb Finch, PhD, the ARCO/William K. Kieschnick Professor in the Neurobiology of Aging at the University of Southern California. “The fact that a lipoprotein in the blood is also a transcription factor that directly controls gene expression makes it an important factor across the lifespan.”  Finch, who was not involved in the research, studies the evolution of the human lifespan and diseases of aging, especially Alzheimer’s. “There is a lot of major work that needs to be done, both within the Alzheimer’s field and within general molecular biology – now that APOE has been identified as such a major player.”

The study was done using a combination of neural cell lines, skin fibroblasts from Alzheimer’s patients, and ApoE targeted mouse brains, and utilized chromatin immunoprecipitation and high-throughput DNA sequencing (ChIP-seq).  The work followed a 2013 study by Bredesen and Rao, along with geneticist Veena Theendakara, which showed a connection between ApoE4 and Alzheimer’s via the anti-aging protein Sirtuin1 (SIRT1), the same molecule whose activity is enhanced by resveratrol, an ingredient in red wine. The presence of ApoE4 triggered the reduction of SIRT1 both in neural cells and in the brains of Alzheimer’s patients with ApoE4. How ApoE4 triggered the reduction of SirT1 was not explained in that study. 

“These results offer an exciting new possibility to design therapeutics that would block the coordinated action of these 1700 ApoE4-associated genes in their Alzheimer’s risk induction, and such an approach is now underway,” said Bredesen.

Citation: Direct Transcriptional Effects of Apolipoprotein E
DOI: 10.1523/JNEUROSCI. 3562-15.2016 

Other Buck researchers involved in the study include Veena Theendakara, Clare A. Peters-Libeu, Patricia Spilman, and Karen S. Poksay. The work was supported by grants from the National Institutes of Health (AG034427), the Joseph Drown Foundation, the Buck Impact Circle, The Marin Community Foundation, the Stephen D. Bechtel, Jr. Foundation and The John and Bonnie Strauss Foundation. 

About the Buck Institute for Research on Aging

The Buck Institute is the U.S.’s first independent research organization devoted to Geroscience – focused on the connection between normal aging and chronic disease. Based in Novato, CA, The Buck is dedicated to extending “Healthspan”, the healthy years of human life and does so utilizing a unique interdisciplinary approach involving laboratories studying the mechanisms of aging and those focused on specific diseases. Buck scientists strive to discover new ways of detecting, preventing and treating age-related diseases such as Alzheimer’s and Parkinson’s, cancer, cardiovascular disease, macular degeneration, osteoporosis, diabetes and stroke.  In their collaborative research, they are supported by the most recent developments in genomics, proteomics, bioinformatics and stem cell technologies. For more information: www.thebuck.org

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